Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 EMBP1-201ENST00000458200 901 ntBASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 IGHV3-52-201ENST00000519770 353 ntBASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 PMPCAP1-201ENST00000508114 1576 ntBASIC17.32■□□□□ 0.36
DNMT3AQ9Y6K1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AKR1C7P-201ENST00000305623 895 ntBASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC019129.2-201ENST00000609837 1235 ntBASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AL355877.3-201ENST00000622820 899 ntBASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC008764.6-201ENST00000595909 2069 ntBASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 AC012313.1-201ENST00000593393 3059 ntBASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DNMT3AQ9Y6K1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.3■□□□□ 0.36
DNMT3AQ9Y6K1 AF238378.1-201ENST00000526806 358 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms