Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 HMGA1P5-201ENST00000412453 271 ntBASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 KRT18P65-201ENST00000439811 1286 ntBASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPS28Q9Y2Q9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ECEL1P2-202ENST00000465689 757 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 FAM87A-204ENST00000613235 858 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 AC010947.1-201ENST00000623454 693 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 AC066615.1-201ENST00000640911 628 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 KRT8P9-201ENST00000558927 1449 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 KRT8P47-201ENST00000604727 1398 ntBASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPS28Q9Y2Q9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPS28Q9Y2Q9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms