Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPG7Q9UQ90 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPG7Q9UQ90 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.96■■□□□ 1.27
SPG7Q9UQ90 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 MYCLP1-201ENST00000372451 1075 ntBASIC22.96■■□□□ 1.27
SPG7Q9UQ90 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 AL078644.1-201ENST00000609881 752 ntBASIC22.96■■□□□ 1.27
SPG7Q9UQ90 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SPG7Q9UQ90 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SPG7Q9UQ90 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SPG7Q9UQ90 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 METTL21AP1-201ENST00000438852 635 ntBASIC22.95■■□□□ 1.26
SPG7Q9UQ90 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 AC096734.2-201ENST00000562054 433 ntBASIC22.95■■□□□ 1.26
SPG7Q9UQ90 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 AC004877.2-201ENST00000623941 599 ntBASIC22.95■■□□□ 1.26
SPG7Q9UQ90 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 AC010507.1-201ENST00000633895 436 ntBASIC22.95■■□□□ 1.26
SPG7Q9UQ90 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SPG7Q9UQ90 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 PDPK2P-202ENST00000562415 1191 ntBASIC22.94■■□□□ 1.26
SPG7Q9UQ90 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 ELL2P1-201ENST00000413990 1906 ntBASIC22.94■■□□□ 1.26
SPG7Q9UQ90 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.94■■□□□ 1.26
SPG7Q9UQ90 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 OR7E47P-204ENST00000575924 449 ntBASIC22.93■■□□□ 1.26
SPG7Q9UQ90 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.93■■□□□ 1.26
SPG7Q9UQ90 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.92■■□□□ 1.26
SPG7Q9UQ90 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms