Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 MIR149-201ENST00000384879 89 ntBASIC17.31■□□□□ 0.36
SATB2Q9UPW6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 FAM220CP-201ENST00000395253 831 ntBASIC17.31■□□□□ 0.36
SATB2Q9UPW6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 AP001269.4-201ENST00000609611 512 ntBASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 AC099343.3-201ENST00000605834 2503 ntBASIC17.31■□□□□ 0.36
SATB2Q9UPW6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SATB2Q9UPW6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SATB2Q9UPW6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AC068472.1-201ENST00000474589 881 ntBASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AC009533.2-201ENST00000543664 586 ntBASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.29■□□□□ 0.36
SATB2Q9UPW6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms