Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB4Q9UN71 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 NAPSB-206ENST00000562112 1266 ntBASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 CROCCP2-202ENST00000412962 2773 ntBASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB4Q9UN71 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 AC008741.2-201ENST00000612792 3115 ntBASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB4Q9UN71 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 AL596257.1-201ENST00000641463 2694 ntBASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 AL023806.1-201ENST00000603994 1649 ntBASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGB4Q9UN71 MIR4497-201ENST00000583208 89 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms