Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AC022898.2-201ENST00000616822 1312 ntBASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 YBX2P1-201ENST00000394192 760 ntBASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AC034105.1-201ENST00000563488 319 ntBASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AC021087.4-201ENST00000563761 564 ntBASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 AP005117.1-201ENST00000584346 1413 ntBASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDC42EP3Q9UKI2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 RPS2P1-201ENST00000434010 821 ntBASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 AC002347.1-201ENST00000569543 541 ntBASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC42EP3Q9UKI2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 INTS4P1-201ENST00000438455 1935 ntBASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 AL356309.3-201ENST00000624132 1934 ntBASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC42EP3Q9UKI2 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms