Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AC135776.1-201ENST00000319817 2481 ntBASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AC112698.1-201ENST00000510299 916 ntBASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 SART3-203ENST00000546611 1184 ntBASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HDAC6Q9UBN7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 AC139530.3-201ENST00000620344 690 ntBASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HDAC6Q9UBN7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.95■□□□□ 0.79
HDAC6Q9UBN7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 KRT18P13-201ENST00000400056 1290 ntBASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HDAC6Q9UBN7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 RPS2P28-201ENST00000314255 741 ntBASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC6Q9UBN7 MIR940-201ENST00000401276 94 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms