Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 RPS15P9-201ENST00000494093 319 ntBASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 IGHV3-65-201ENST00000523210 341 ntBASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 AC008667.4-201ENST00000607370 168 ntBASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 AC104581.1-202ENST00000635932 2618 ntBASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AC211486.1-202ENST00000416371 468 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 VN2R19P-201ENST00000442399 1052 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AC211476.1-201ENST00000503899 468 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 MIR4751-201ENST00000578027 74 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AC004790.2-201ENST00000623588 572 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 AC009949.1-201ENST00000623048 1830 ntBASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3BQ9UBC3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 HCG4B-203ENST00000450128 991 ntBASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AC018845.2-201ENST00000568326 409 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms