Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL356309.3-201ENST00000624132 1934 ntBASIC21.51■■□□□ 1.03
HMG20BQ9P0W2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMG20BQ9P0W2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 AC134043.2-201ENST00000624206 2238 ntBASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 NKAPP1-205ENST00000585790 367 ntBASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 AL049840.3-201ENST00000602669 611 ntBASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 AC064862.7-201ENST00000604520 867 ntBASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMG20BQ9P0W2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AC006116.8-202ENST00000587620 1550 ntBASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AL049757.1-201ENST00000616842 1596 ntBASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 SCARNA2-201ENST00000458748 420 ntBASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AP001005.1-201ENST00000571755 1248 ntBASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMG20BQ9P0W2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 AC103564.2-201ENST00000432853 1299 ntBASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 AC073648.2-201ENST00000510116 352 ntBASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HMG20BQ9P0W2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 DDX43P3-201ENST00000441064 443 ntBASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 AC025062.2-201ENST00000605477 670 ntBASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 AC019129.2-201ENST00000609837 1235 ntBASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 AC116407.2-201ENST00000613639 860 ntBASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 MIR7706-201ENST00000613747 67 ntBASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HMG20BQ9P0W2 AC079776.2-201ENST00000641154 1609 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms