Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AL513523.2-202ENST00000427283 2040 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AC105917.1-201ENST00000506637 2539 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AL355355.2-201ENST00000442321 338 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AP005242.2-201ENST00000580065 1175 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AC233702.5-201ENST00000584107 538 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AC026471.5-201ENST00000615068 467 ntBASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPTLC3Q9NUV7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 AC012618.2-201ENST00000428058 849 ntBASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SPTLC3Q9NUV7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 AC132872.4-202ENST00000622924 2756 ntBASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 KRT8P7-201ENST00000533003 1432 ntBASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 AL353719.1-201ENST00000566847 864 ntBASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 LINC01451-201ENST00000623792 534 ntBASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPTLC3Q9NUV7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 REXO1L11P-201ENST00000620964 1927 ntBASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms