Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KRT8P47-201ENST00000604727 1398 ntBASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 BX276092.7-203ENST00000637198 1536 ntBASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 AL355075.4-201ENST00000554988 638 ntBASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 NAPSB-206ENST00000562112 1266 ntBASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 CYP2D8P-201ENST00000433633 1490 ntBASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 AL118508.1-201ENST00000613502 2345 ntBASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC42SE2Q9NRR3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 LYSMD4-203ENST00000378904 2122 ntBASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC42SE2Q9NRR3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms