Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AC103564.2-201ENST00000432853 1299 ntBASIC16.24■□□□□ 0.19
CHD8Q9HCK8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AC097637.2-201ENST00000624096 1997 ntBASIC16.24■□□□□ 0.19
CHD8Q9HCK8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 RARRES2P8-201ENST00000566335 367 ntBASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AC009407.1-201ENST00000568958 598 ntBASIC16.24■□□□□ 0.19
CHD8Q9HCK8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AL512343.1-201ENST00000605837 169 ntBASIC16.24■□□□□ 0.19
CHD8Q9HCK8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 ALG1L8P-201ENST00000533887 760 ntBASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC073592.8-201ENST00000624126 511 ntBASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC007541.1-201ENST00000570282 1469 ntBASIC16.23■□□□□ 0.19
CHD8Q9HCK8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 SPCS2P4-201ENST00000436160 681 ntBASIC16.23■□□□□ 0.19
CHD8Q9HCK8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD8Q9HCK8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 AC099548.2-209ENST00000480264 625 ntBASIC16.22■□□□□ 0.19
CHD8Q9HCK8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHD8Q9HCK8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 RN7SL837P-201ENST00000463010 287 ntBASIC16.21■□□□□ 0.19
CHD8Q9HCK8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms