Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 AL133373.2-201ENST00000623187 2828 ntBASIC15.47■□□□□ 0.07
CDH20Q9HBT6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 MIR3180-1-201ENST00000580374 94 ntBASIC15.47■□□□□ 0.07
CDH20Q9HBT6 MIR3180-3-201ENST00000584616 94 ntBASIC15.47■□□□□ 0.07
CDH20Q9HBT6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.47■□□□□ 0.07
CDH20Q9HBT6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CDH20Q9HBT6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 AC100803.2-201ENST00000562459 1963 ntBASIC15.46■□□□□ 0.07
CDH20Q9HBT6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 SLC25A6P5-201ENST00000435663 894 ntBASIC15.46■□□□□ 0.07
CDH20Q9HBT6 KRT17P6-201ENST00000453795 1220 ntBASIC15.46■□□□□ 0.07
CDH20Q9HBT6 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 AC012615.1-201ENST00000565797 1299 ntBASIC15.46■□□□□ 0.07
CDH20Q9HBT6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH20Q9HBT6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH20Q9HBT6 AC018470.1-201ENST00000624790 3129 ntBASIC15.46■□□□□ 0.06
CDH20Q9HBT6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH20Q9HBT6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms