Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.89■□□□□ 0.3
BRF2Q9HAW0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AC125634.1-201ENST00000438758 1403 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AC246785.2-201ENST00000432512 513 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AC007967.3-201ENST00000434308 558 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AC011840.4-201ENST00000578471 627 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 AL139327.4-201ENST00000612362 153 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 IGHV3-41-201ENST00000613121 348 ntBASIC16.89■□□□□ 0.29
BRF2Q9HAW0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRF2Q9HAW0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 MYCLP1-201ENST00000372451 1075 ntBASIC16.88■□□□□ 0.29
BRF2Q9HAW0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 KRT18P21-201ENST00000515767 1272 ntBASIC16.88■□□□□ 0.29
BRF2Q9HAW0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 AL049597.2-201ENST00000565575 961 ntBASIC16.88■□□□□ 0.29
BRF2Q9HAW0 AL138831.2-201ENST00000606564 490 ntBASIC16.88■□□□□ 0.29
BRF2Q9HAW0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRF2Q9HAW0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AC122714.2-201ENST00000502787 707 ntBASIC16.87■□□□□ 0.29
BRF2Q9HAW0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRF2Q9HAW0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms