Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF41Q9H4P4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF41Q9H4P4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RNF41Q9H4P4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 HLA-J-201ENST00000462773 1622 ntBASIC20.82■□□□□ 0.92
RNF41Q9H4P4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AC004870.1-201ENST00000315132 882 ntBASIC20.82■□□□□ 0.92
RNF41Q9H4P4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 RN7SL510P-201ENST00000581311 263 ntBASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AC133963.1-201ENST00000504166 1679 ntBASIC20.82■□□□□ 0.92
RNF41Q9H4P4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF41Q9H4P4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 FAAHP1-202ENST00000446499 1238 ntBASIC20.81■□□□□ 0.92
RNF41Q9H4P4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 AC073592.5-201ENST00000624854 528 ntBASIC20.81■□□□□ 0.92
RNF41Q9H4P4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF41Q9H4P4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AL355312.1-201ENST00000407115 2176 ntBASIC20.8■□□□□ 0.92
RNF41Q9H4P4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AC068880.1-201ENST00000507289 2297 ntBASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 EMBP1-201ENST00000458200 901 ntBASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 AL355877.3-201ENST00000622820 899 ntBASIC20.8■□□□□ 0.92
RNF41Q9H4P4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF41Q9H4P4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.79■□□□□ 0.92
RNF41Q9H4P4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms