Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN3Q9H347 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBQLN3Q9H347 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBQLN3Q9H347 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AC108860.2-201ENST00000562760 2183 ntBASIC16.38■□□□□ 0.21
UBQLN3Q9H347 PRORSD1P-202ENST00000563365 2154 ntBASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AC132938.6-201ENST00000623828 1655 ntBASIC16.38■□□□□ 0.21
UBQLN3Q9H347 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AC104819.1-201ENST00000504587 486 ntBASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBQLN3Q9H347 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC074051.2-201ENST00000565115 352 ntBASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBQLN3Q9H347 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AC141586.5-201ENST00000624546 2050 ntBASIC16.36■□□□□ 0.21
UBQLN3Q9H347 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBQLN3Q9H347 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms