Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AC122714.2-201ENST00000502787 707 ntBASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AC139887.3-201ENST00000568585 713 ntBASIC18.07■□□□□ 0.48
CIPCQ9C0C6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 NKAPP1-205ENST00000585790 367 ntBASIC18.07■□□□□ 0.48
CIPCQ9C0C6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AP000867.4-201ENST00000641616 219 ntBASIC18.07■□□□□ 0.48
CIPCQ9C0C6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CIPCQ9C0C6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
CIPCQ9C0C6 OR7E14P-202ENST00000530490 1290 ntBASIC18.06■□□□□ 0.48
CIPCQ9C0C6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 AC100803.2-201ENST00000562459 1963 ntBASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
CIPCQ9C0C6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.05■□□□□ 0.48
CIPCQ9C0C6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 BX005266.1-201ENST00000473402 457 ntBASIC18.05■□□□□ 0.48
CIPCQ9C0C6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.05■□□□□ 0.48
CIPCQ9C0C6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms