Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC007618.1-201ENST00000366455 732 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CCNB2P1-201ENST00000399411 1150 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 BID-204ENST00000399767 2129 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL355143.1-201ENST00000407101 841 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL353626.3-201ENST00000413399 657 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL020989.1-201ENST00000422979 469 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC244107.1-201ENST00000442033 332 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC069277.2-201ENST00000454211 432 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL117351.2-201ENST00000513571 157 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 KRT19P2-202ENST00000557173 1012 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 OR7E47P-204ENST00000575924 449 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 E2F3P1-201ENST00000589887 1230 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC092574.1-201ENST00000609771 420 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC022919.1-201ENST00000624979 626 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL049757.1-201ENST00000616842 1596 ntBASIC8.1□□□□□ -1.11
KRTAP9-3Q9BYQ3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC007952.6-201ENST00000573168 2673 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 AC003957.1-201ENST00000625108 2673 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 PCDHAC2-203ENST00000615316 3011 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 AL050305.1-201ENST00000399993 1230 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 HNRNPDP2-201ENST00000406475 478 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 VN1R11P-201ENST00000407795 868 ntBASIC8.09□□□□□ -1.11
KRTAP9-3Q9BYQ3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms