Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AL049757.1-201ENST00000616842 1596 ntBASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC132008.2-207ENST00000454517 770 ntBASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC106795.1-205ENST00000512851 1056 ntBASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC109462.3-201ENST00000573934 613 ntBASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM62Q9BVG3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 LINC00304-203ENST00000565008 1864 ntBASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 AC012317.2-201ENST00000623305 2251 ntBASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.39■□□□□ 0.54
TRIM62Q9BVG3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 FAAHP1-202ENST00000446499 1238 ntBASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 AP000867.4-201ENST00000641616 219 ntBASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM62Q9BVG3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AC004870.1-201ENST00000315132 882 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 AP005117.1-201ENST00000584346 1413 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM62Q9BVG3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms