Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NPAS2Q99743 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS2Q99743 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 AC100803.2-201ENST00000562459 1963 ntBASIC17.32■□□□□ 0.36
NPAS2Q99743 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS2Q99743 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
NPAS2Q99743 AC112907.2-201ENST00000448639 330 ntBASIC17.32■□□□□ 0.36
NPAS2Q99743 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS2Q99743 AC083849.1-201ENST00000615227 514 ntBASIC17.32■□□□□ 0.36
NPAS2Q99743 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS2Q99743 AL121956.5-201ENST00000625261 221 ntBASIC17.32■□□□□ 0.36
NPAS2Q99743 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS2Q99743 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS2Q99743 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NPAS2Q99743 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS2Q99743 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NPAS2Q99743 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS2Q99743 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS2Q99743 AC024243.1-201ENST00000609234 778 ntBASIC17.31■□□□□ 0.36
NPAS2Q99743 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS2Q99743 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 AC133963.1-201ENST00000504166 1679 ntBASIC17.31■□□□□ 0.36
NPAS2Q99743 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 AL121761.2-201ENST00000598007 1648 ntBASIC17.31■□□□□ 0.36
NPAS2Q99743 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NPAS2Q99743 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS2Q99743 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS2Q99743 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS2Q99743 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS2Q99743 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPAS2Q99743 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 AL118508.1-201ENST00000613502 2345 ntBASIC17.3■□□□□ 0.36
NPAS2Q99743 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NPAS2Q99743 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS2Q99743 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS2Q99743 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS2Q99743 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS2Q99743 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS2Q99743 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS2Q99743 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS2Q99743 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 UBALD1-205ENST00000590891 2641 ntBASIC17.3■□□□□ 0.36
NPAS2Q99743 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS2Q99743 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NPAS2Q99743 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NPAS2Q99743 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS2Q99743 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS2Q99743 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS2Q99743 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS2Q99743 PCED1CP-201ENST00000419887 785 ntBASIC17.29■□□□□ 0.36
NPAS2Q99743 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.29■□□□□ 0.36
NPAS2Q99743 SEC1P-202ENST00000473944 940 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms