Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNF558Q96NG5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF558Q96NG5 HCG11-201ENST00000411553 5696 ntBASIC18.67■□□□□ 0.58
ZNF558Q96NG5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 KRT19P2-202ENST00000557173 1012 ntBASIC18.66■□□□□ 0.58
ZNF558Q96NG5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.66■□□□□ 0.58
ZNF558Q96NG5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF558Q96NG5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 OR7E47P-204ENST00000575924 449 ntBASIC18.65■□□□□ 0.58
ZNF558Q96NG5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF558Q96NG5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms