Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 PGAM5P1-201ENST00000518923 814 ntBASIC20.54■□□□□ 0.88
CCDC17Q96LX7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 AC006504.4-201ENST00000592118 1568 ntBASIC20.54■□□□□ 0.88
CCDC17Q96LX7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC17Q96LX7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 SLC25A6P5-201ENST00000435663 894 ntBASIC20.53■□□□□ 0.88
CCDC17Q96LX7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 AC006538.3-201ENST00000612495 578 ntBASIC20.53■□□□□ 0.88
CCDC17Q96LX7 LINC01451-201ENST00000623792 534 ntBASIC20.53■□□□□ 0.88
CCDC17Q96LX7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 REXO1L11P-201ENST00000620964 1927 ntBASIC20.53■□□□□ 0.88
CCDC17Q96LX7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC17Q96LX7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 AC097637.2-201ENST00000624096 1997 ntBASIC20.52■□□□□ 0.88
CCDC17Q96LX7 AL354751.1-201ENST00000412768 1863 ntBASIC20.52■□□□□ 0.88
CCDC17Q96LX7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 KRT18P3-201ENST00000451602 1288 ntBASIC20.52■□□□□ 0.88
CCDC17Q96LX7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC17Q96LX7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC17Q96LX7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 AC108751.1-201ENST00000490852 363 ntBASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 GPALPP1-207ENST00000611650 899 ntBASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 AC135050.7-201ENST00000624508 2218 ntBASIC20.51■□□□□ 0.87
CCDC17Q96LX7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC17Q96LX7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms