Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 MYCLP1-201ENST00000372451 1075 ntBASIC22.69■■□□□ 1.22
ZNF428Q96B54 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF428Q96B54 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF428Q96B54 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 AC008608.2-201ENST00000606089 416 ntBASIC22.69■■□□□ 1.22
ZNF428Q96B54 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF428Q96B54 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
ZNF428Q96B54 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF428Q96B54 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZNF428Q96B54 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 AL049757.1-201ENST00000616842 1596 ntBASIC22.68■■□□□ 1.22
ZNF428Q96B54 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZNF428Q96B54 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.68■■□□□ 1.22
ZNF428Q96B54 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 AL590627.1-203ENST00000421194 1026 ntBASIC22.67■■□□□ 1.22
ZNF428Q96B54 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.67■■□□□ 1.22
ZNF428Q96B54 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZNF428Q96B54 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 AL353593.2-201ENST00000602529 1483 ntBASIC22.66■■□□□ 1.22
ZNF428Q96B54 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 HNRNPDP1-201ENST00000439535 754 ntBASIC22.66■■□□□ 1.22
ZNF428Q96B54 AC106795.1-205ENST00000512851 1056 ntBASIC22.66■■□□□ 1.22
ZNF428Q96B54 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 MTDHP3-201ENST00000594186 672 ntBASIC22.66■■□□□ 1.22
ZNF428Q96B54 AL671883.3-201ENST00000603274 991 ntBASIC22.66■■□□□ 1.22
ZNF428Q96B54 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ZNF428Q96B54 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZNF428Q96B54 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 AD001527.2-201ENST00000622994 785 ntBASIC22.65■■□□□ 1.22
ZNF428Q96B54 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.65■■□□□ 1.22
ZNF428Q96B54 AF228730.7-201ENST00000641842 219 ntBASIC22.65■■□□□ 1.22
ZNF428Q96B54 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZNF428Q96B54 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms