Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 CRYGEP-201ENST00000412192 528 ntBASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 AC002558.1-201ENST00000488906 803 ntBASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 MIR4751-201ENST00000578027 74 ntBASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 MTDHP5-201ENST00000598980 586 ntBASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 AC009336.1-201ENST00000608941 1553 ntBASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3TC1Q8TE82 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 VN2R19P-201ENST00000442399 1052 ntBASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 AC004967.1-201ENST00000453589 447 ntBASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 AP001160.2-201ENST00000596071 487 ntBASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 ABALON-201ENST00000629058 1903 ntBASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.91■■□□□ 1.1
SH3TC1Q8TE82 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 AL805961.1-202ENST00000641562 540 ntBASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH3TC1Q8TE82 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH3TC1Q8TE82 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms