Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 AC114341.1-201ENST00000618070 349 ntBASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC148Q8NFR7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 NUS1P1-201ENST00000446295 882 ntBASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC148Q8NFR7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC148Q8NFR7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 AC138894.3-201ENST00000603787 634 ntBASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 LINC01451-201ENST00000623792 534 ntBASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 PKD1P1-201ENST00000458669 6805 ntBASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC148Q8NFR7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 NUS1P2-201ENST00000417358 873 ntBASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms