Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 RN7SL606P-201ENST00000472779 293 ntBASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 FAM86EP-206ENST00000510506 987 ntBASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 IGHV3-41-201ENST00000613121 348 ntBASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 HLA-J-201ENST00000462773 1622 ntBASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TTC9CQ8N5M4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 AC005332.1-201ENST00000577698 1310 ntBASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 LINC00304-203ENST00000565008 1864 ntBASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 AC124864.1-201ENST00000623408 392 ntBASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TTC9CQ8N5M4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TTC9CQ8N5M4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms