Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 AL645939.2-201ENST00000427340 991 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 PRSS29P-201ENST00000440800 595 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 AP002472.1-201ENST00000577490 586 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 MIR3197-201ENST00000582241 73 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 ELL2P1-201ENST00000413990 1906 ntBASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TMEFF1Q8IYR6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 AL020996.1-203ENST00000536896 2307 ntBASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 MKNK2P1-201ENST00000437526 628 ntBASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 AC106028.4-201ENST00000614509 607 ntBASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEFF1Q8IYR6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 DUTP2-201ENST00000519164 463 ntBASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEFF1Q8IYR6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEFF1Q8IYR6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEFF1Q8IYR6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms