Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 FAM220CP-201ENST00000395253 831 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AC132008.2-207ENST00000454517 770 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AC116407.2-201ENST00000613639 860 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AL031008.1-201ENST00000619963 541 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 OR6D1P-203ENST00000641209 4860 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 AC020916.1-201ENST00000587762 1774 ntBASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM48Q8IWZ4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AKR1C7P-201ENST00000305623 895 ntBASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AC079781.3-201ENST00000449110 356 ntBASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AL121912.1-201ENST00000603683 238 ntBASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM48Q8IWZ4 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 INTS4P1-201ENST00000438455 1935 ntBASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM48Q8IWZ4 KRT8P10-201ENST00000450021 1447 ntBASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 KRT8P47-201ENST00000604727 1398 ntBASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 AC008608.2-201ENST00000606089 416 ntBASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM48Q8IWZ4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms