Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 AC092338.2-201ENST00000568827 1415 ntBASIC18.27■□□□□ 0.52
CCDC25Q86WR0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 AL158047.1-201ENST00000445918 881 ntBASIC18.27■□□□□ 0.52
CCDC25Q86WR0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 ITM2C-210ENST00000620962 501 ntBASIC18.27■□□□□ 0.52
CCDC25Q86WR0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC25Q86WR0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC25Q86WR0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AC008894.3-201ENST00000624324 3103 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AC012618.2-201ENST00000428058 849 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AP003071.4-201ENST00000562276 1284 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AC233702.5-201ENST00000584107 538 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 AC106886.4-201ENST00000623557 2502 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.26■□□□□ 0.51
CCDC25Q86WR0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC25Q86WR0 LINC00167-201ENST00000530583 1419 ntBASIC18.25■□□□□ 0.51
CCDC25Q86WR0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AC024243.1-201ENST00000609234 778 ntBASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AC116407.2-201ENST00000613639 860 ntBASIC18.25■□□□□ 0.51
CCDC25Q86WR0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC25Q86WR0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms