Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CROCCP2-202ENST00000412962 2773 ntBASIC17.64■□□□□ 0.41
LDB1Q86U70 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB1Q86U70 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LDB1Q86U70 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB1Q86U70 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
LDB1Q86U70 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB1Q86U70 BX276092.5-203ENST00000456199 560 ntBASIC17.64■□□□□ 0.41
LDB1Q86U70 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.64■□□□□ 0.41
LDB1Q86U70 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LDB1Q86U70 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.64■□□□□ 0.41
LDB1Q86U70 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
LDB1Q86U70 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB1Q86U70 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
LDB1Q86U70 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
LDB1Q86U70 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LDB1Q86U70 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LDB1Q86U70 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB1Q86U70 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB1Q86U70 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB1Q86U70 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LDB1Q86U70 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 AL445228.2-201ENST00000605589 952 ntBASIC17.63■□□□□ 0.41
LDB1Q86U70 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LDB1Q86U70 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 IER3-202ENST00000376377 1350 ntBASIC17.63■□□□□ 0.41
LDB1Q86U70 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LDB1Q86U70 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.63■□□□□ 0.41
LDB1Q86U70 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LDB1Q86U70 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LDB1Q86U70 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LDB1Q86U70 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.62■□□□□ 0.41
LDB1Q86U70 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms