Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SHC4Q6S5L8 AC016396.2-201ENST00000562575 1417 ntBASIC19.92■□□□□ 0.78
SHC4Q6S5L8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 AC116353.5-201ENST00000638148 1699 ntBASIC19.91■□□□□ 0.78
SHC4Q6S5L8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 TSPY22P-201ENST00000427496 604 ntBASIC19.91■□□□□ 0.78
SHC4Q6S5L8 AC007967.3-201ENST00000434308 558 ntBASIC19.91■□□□□ 0.78
SHC4Q6S5L8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.91■□□□□ 0.78
SHC4Q6S5L8 NKILA-202ENST00000614771 2598 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 SLC25A1P3-201ENST00000395415 828 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 TMPOP1-202ENST00000424642 1267 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC002558.1-201ENST00000488906 803 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC005336.2-201ENST00000593183 939 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC019129.2-201ENST00000609837 1235 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AL592071.1-201ENST00000611956 408 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC011676.5-201ENST00000624864 2660 ntBASIC19.9■□□□□ 0.78
SHC4Q6S5L8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC4Q6S5L8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SHC4Q6S5L8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 AC125634.1-201ENST00000438758 1403 ntBASIC19.89■□□□□ 0.77
SHC4Q6S5L8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 AL136038.3-201ENST00000561909 1096 ntBASIC19.89■□□□□ 0.77
SHC4Q6S5L8 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 AC011498.5-201ENST00000592027 486 ntBASIC19.89■□□□□ 0.77
SHC4Q6S5L8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SHC4Q6S5L8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms