Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AC005332.1-201ENST00000577698 1310 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AC005104.2-201ENST00000427818 678 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 FAM86EP-206ENST00000510506 987 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AL353801.3-201ENST00000609898 542 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AL592071.1-201ENST00000611956 408 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 AL121956.5-201ENST00000625261 221 ntBASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF549Q6P9A3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 GUSBP12-201ENST00000513727 720 ntBASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 AC124864.1-201ENST00000623408 392 ntBASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF549Q6P9A3 AC080080.1-201ENST00000625121 2420 ntBASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AC097374.2-201ENST00000618617 1306 ntBASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AL023806.1-201ENST00000603994 1649 ntBASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 KRT8P26-201ENST00000534154 1276 ntBASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF549Q6P9A3 AC012313.1-201ENST00000593393 3059 ntBASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF549Q6P9A3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms