Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FAM78BQ5VT40 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AC133963.1-201ENST00000504166 1679 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 B3GAT3P1-201ENST00000471720 806 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AC011506.1-201ENST00000474329 610 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 AP001412.1-201ENST00000608405 714 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 LINC01126-201ENST00000623515 1646 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FAM78BQ5VT40 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.07□□□□□ -0.16
FAM78BQ5VT40 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 AL513477.1-201ENST00000602865 2407 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 AC036111.1-201ENST00000533973 1582 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 RPS2P55-201ENST00000397318 883 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 AC107956.1-201ENST00000494359 873 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 FSCN1P1-201ENST00000568912 1481 ntBASIC14.06□□□□□ -0.16
FAM78BQ5VT40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FAM78BQ5VT40 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 TSPY26P-202ENST00000565928 3884 ntBASIC14.05□□□□□ -0.16
FAM78BQ5VT40 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.05□□□□□ -0.16
FAM78BQ5VT40 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms