Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GABPAQ06546 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
GABPAQ06546 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.65■□□□□ 0.9
GABPAQ06546 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 MIR940-201ENST00000401276 94 ntBASIC20.65■□□□□ 0.9
GABPAQ06546 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 AL591424.1-201ENST00000442569 1213 ntBASIC20.65■□□□□ 0.9
GABPAQ06546 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.65■□□□□ 0.9
GABPAQ06546 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.65■□□□□ 0.9
GABPAQ06546 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 MIR1199-201ENST00000621445 119 ntBASIC20.65■□□□□ 0.9
GABPAQ06546 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.65■□□□□ 0.9
GABPAQ06546 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 AC135050.7-201ENST00000624508 2218 ntBASIC20.65■□□□□ 0.9
GABPAQ06546 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GABPAQ06546 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABPAQ06546 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.64■□□□□ 0.9
GABPAQ06546 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
GABPAQ06546 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GABPAQ06546 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GABPAQ06546 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
GABPAQ06546 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABPAQ06546 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GABPAQ06546 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GABPAQ06546 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABPAQ06546 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.64■□□□□ 0.89
GABPAQ06546 MYCLP1-201ENST00000372451 1075 ntBASIC20.64■□□□□ 0.89
GABPAQ06546 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.64■□□□□ 0.89
GABPAQ06546 MED15P5-201ENST00000423150 992 ntBASIC20.64■□□□□ 0.89
GABPAQ06546 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.64■□□□□ 0.89
GABPAQ06546 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.64■□□□□ 0.89
GABPAQ06546 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.64■□□□□ 0.89
GABPAQ06546 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.64■□□□□ 0.89
GABPAQ06546 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GABPAQ06546 AC005593.1-201ENST00000624894 515 ntBASIC20.64■□□□□ 0.89
GABPAQ06546 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.64■□□□□ 0.89
GABPAQ06546 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GABPAQ06546 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABPAQ06546 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.63■□□□□ 0.89
GABPAQ06546 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
GABPAQ06546 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 GPALPP1-207ENST00000611650 899 ntBASIC20.63■□□□□ 0.89
GABPAQ06546 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.63■□□□□ 0.89
GABPAQ06546 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.63■□□□□ 0.89
GABPAQ06546 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABPAQ06546 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms