Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSBP1Q04837 IKBKGP1-201ENST00000612193 1073 ntBASIC14.97□□□□□ -0.01
SSBP1Q04837 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.97□□□□□ -0.01
SSBP1Q04837 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.97□□□□□ -0.01
SSBP1Q04837 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSBP1Q04837 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP1Q04837 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSBP1Q04837 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.97□□□□□ -0.01
SSBP1Q04837 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.97□□□□□ -0.01
SSBP1Q04837 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.97□□□□□ -0.01
SSBP1Q04837 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 AL513523.2-202ENST00000427283 2040 ntBASIC14.97□□□□□ -0.01
SSBP1Q04837 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSBP1Q04837 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.97□□□□□ -0.01
SSBP1Q04837 BX276092.7-203ENST00000637198 1536 ntBASIC14.97□□□□□ -0.01
SSBP1Q04837 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSBP1Q04837 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 AC006449.5-201ENST00000610658 2098 ntBASIC14.96□□□□□ -0.01
SSBP1Q04837 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.96□□□□□ -0.01
SSBP1Q04837 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.96□□□□□ -0.01
SSBP1Q04837 AC142086.2-201ENST00000569753 217 ntBASIC14.96□□□□□ -0.01
SSBP1Q04837 AF186192.3-201ENST00000583427 947 ntBASIC14.96□□□□□ -0.01
SSBP1Q04837 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.96□□□□□ -0.01
SSBP1Q04837 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 CICP6-201ENST00000457191 2729 ntBASIC14.96□□□□□ -0.01
SSBP1Q04837 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSBP1Q04837 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SSBP1Q04837 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP1Q04837 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.96□□□□□ -0.02
SSBP1Q04837 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.96□□□□□ -0.02
SSBP1Q04837 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.96□□□□□ -0.02
SSBP1Q04837 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP1Q04837 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSBP1Q04837 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.96□□□□□ -0.02
SSBP1Q04837 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.95□□□□□ -0.02
SSBP1Q04837 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.95□□□□□ -0.02
SSBP1Q04837 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 SLC25A1P4-201ENST00000567977 778 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms