Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK3Q00526 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK3Q00526 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK3Q00526 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 AC003669.1-201ENST00000334569 611 ntBASIC17.36■□□□□ 0.37
CDK3Q00526 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 AL020989.1-201ENST00000422979 469 ntBASIC17.36■□□□□ 0.37
CDK3Q00526 SLC25A6P5-201ENST00000435663 894 ntBASIC17.36■□□□□ 0.37
CDK3Q00526 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK3Q00526 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 MIR7706-201ENST00000613747 67 ntBASIC17.36■□□□□ 0.37
CDK3Q00526 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK3Q00526 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 AC004817.3-201ENST00000602957 2129 ntBASIC17.36■□□□□ 0.37
CDK3Q00526 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK3Q00526 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDK3Q00526 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDK3Q00526 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 REXO1L11P-201ENST00000620964 1927 ntBASIC17.35■□□□□ 0.37
CDK3Q00526 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 RPS2P28-201ENST00000314255 741 ntBASIC17.35■□□□□ 0.37
CDK3Q00526 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK3Q00526 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK3Q00526 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK3Q00526 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK3Q00526 STK25P1-201ENST00000585406 838 ntBASIC17.35■□□□□ 0.37
CDK3Q00526 AL049840.3-201ENST00000602669 611 ntBASIC17.35■□□□□ 0.37
CDK3Q00526 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK3Q00526 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDK3Q00526 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK3Q00526 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK3Q00526 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDK3Q00526 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 MYCLP1-201ENST00000372451 1075 ntBASIC17.34■□□□□ 0.37
CDK3Q00526 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK3Q00526 HCG11-201ENST00000411553 5696 ntBASIC17.34■□□□□ 0.37
CDK3Q00526 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.34■□□□□ 0.37
CDK3Q00526 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.34■□□□□ 0.37
CDK3Q00526 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK3Q00526 PRYP5-201ENST00000451909 266 ntBASIC17.34■□□□□ 0.37
CDK3Q00526 AC093909.1-201ENST00000504731 1122 ntBASIC17.34■□□□□ 0.37
CDK3Q00526 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.34■□□□□ 0.37
CDK3Q00526 OR7E14P-202ENST00000530490 1290 ntBASIC17.34■□□□□ 0.37
CDK3Q00526 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms