Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20■□□□□ 0.79
CCNA1P78396 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20■□□□□ 0.79
CCNA1P78396 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20■□□□□ 0.79
CCNA1P78396 AC074386.1-202ENST00000463561 864 ntBASIC20■□□□□ 0.79
CCNA1P78396 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
CCNA1P78396 AC023141.13-201ENST00000604991 943 ntBASIC20■□□□□ 0.79
CCNA1P78396 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20■□□□□ 0.79
CCNA1P78396 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20■□□□□ 0.79
CCNA1P78396 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20■□□□□ 0.79
CCNA1P78396 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20■□□□□ 0.79
CCNA1P78396 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20■□□□□ 0.79
CCNA1P78396 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20■□□□□ 0.79
CCNA1P78396 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNA1P78396 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNA1P78396 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNA1P78396 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNA1P78396 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNA1P78396 AL031432.2-201ENST00000566714 459 ntBASIC19.99■□□□□ 0.79
CCNA1P78396 AL928711.1-201ENST00000570165 459 ntBASIC19.99■□□□□ 0.79
CCNA1P78396 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNA1P78396 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNA1P78396 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNA1P78396 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCNA1P78396 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CCNA1P78396 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCNA1P78396 AC093677.2-201ENST00000600169 1863 ntBASIC19.99■□□□□ 0.79
CCNA1P78396 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNA1P78396 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNA1P78396 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCNA1P78396 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNA1P78396 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 FAM58CP-201ENST00000435741 640 ntBASIC19.98■□□□□ 0.79
CCNA1P78396 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNA1P78396 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.98■□□□□ 0.79
CCNA1P78396 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNA1P78396 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 AC025580.3-201ENST00000617932 1424 ntBASIC19.98■□□□□ 0.79
CCNA1P78396 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.98■□□□□ 0.79
CCNA1P78396 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNA1P78396 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.97■□□□□ 0.79
CCNA1P78396 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 AC100803.2-201ENST00000562459 1963 ntBASIC19.97■□□□□ 0.79
CCNA1P78396 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.97■□□□□ 0.79
CCNA1P78396 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.97■□□□□ 0.79
CCNA1P78396 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNA1P78396 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
CCNA1P78396 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCNA1P78396 AP000344.2-201ENST00000512987 629 ntBASIC19.97■□□□□ 0.79
CCNA1P78396 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.97■□□□□ 0.79
CCNA1P78396 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.97■□□□□ 0.79
CCNA1P78396 OR7E47P-204ENST00000575924 449 ntBASIC19.97■□□□□ 0.79
CCNA1P78396 MIR3197-201ENST00000582241 73 ntBASIC19.97■□□□□ 0.79
CCNA1P78396 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.97■□□□□ 0.79
CCNA1P78396 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms