Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.12■□□□□ 0.17
CXCR4P61073 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 FAM201B-201ENST00000458407 597 ntBASIC16.12■□□□□ 0.17
CXCR4P61073 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.12■□□□□ 0.17
CXCR4P61073 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.12■□□□□ 0.17
CXCR4P61073 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CXCR4P61073 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.12■□□□□ 0.17
CXCR4P61073 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CXCR4P61073 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.12■□□□□ 0.17
CXCR4P61073 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CXCR4P61073 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CXCR4P61073 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CXCR4P61073 PCDHB17P-201ENST00000539533 2393 ntBASIC16.12■□□□□ 0.17
CXCR4P61073 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.12■□□□□ 0.17
CXCR4P61073 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CXCR4P61073 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 CYP2T1P-202ENST00000641596 2535 ntBASIC16.11■□□□□ 0.17
CXCR4P61073 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CXCR4P61073 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.11■□□□□ 0.17
CXCR4P61073 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.11■□□□□ 0.17
CXCR4P61073 AC006449.5-201ENST00000610658 2098 ntBASIC16.11■□□□□ 0.17
CXCR4P61073 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CXCR4P61073 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.11■□□□□ 0.17
CXCR4P61073 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.11■□□□□ 0.17
CXCR4P61073 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.11■□□□□ 0.17
CXCR4P61073 REXO1L10P-201ENST00000615707 1290 ntBASIC16.11■□□□□ 0.17
CXCR4P61073 REXO1L12P-201ENST00000622156 912 ntBASIC16.11■□□□□ 0.17
CXCR4P61073 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.11■□□□□ 0.17
CXCR4P61073 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.11■□□□□ 0.17
CXCR4P61073 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CXCR4P61073 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.11■□□□□ 0.17
CXCR4P61073 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 AC009949.1-201ENST00000623048 1830 ntBASIC16.1■□□□□ 0.17
CXCR4P61073 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.1■□□□□ 0.17
CXCR4P61073 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 KRT18P29-201ENST00000397031 1267 ntBASIC16.1■□□□□ 0.17
CXCR4P61073 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.1■□□□□ 0.17
CXCR4P61073 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
CXCR4P61073 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.1■□□□□ 0.17
CXCR4P61073 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 ITM2C-210ENST00000620962 501 ntBASIC16.1■□□□□ 0.17
CXCR4P61073 AC008894.3-201ENST00000624324 3103 ntBASIC16.1■□□□□ 0.17
CXCR4P61073 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 AC022188.1-201ENST00000620960 1664 ntBASIC16.1■□□□□ 0.17
CXCR4P61073 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms