Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP4BP1P59074 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHMP4BP1P59074 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 AC112777.1-201ENST00000540175 1423 ntBASIC20.2■□□□□ 0.82
CHMP4BP1P59074 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 KRT18P67-201ENST00000432816 1264 ntBASIC20.2■□□□□ 0.82
CHMP4BP1P59074 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.2■□□□□ 0.82
CHMP4BP1P59074 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHMP4BP1P59074 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 MTDHP3-201ENST00000594186 672 ntBASIC20.19■□□□□ 0.82
CHMP4BP1P59074 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP4BP1P59074 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.18■□□□□ 0.82
CHMP4BP1P59074 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 AC093909.1-201ENST00000504731 1122 ntBASIC20.18■□□□□ 0.82
CHMP4BP1P59074 AC113404.2-201ENST00000507884 177 ntBASIC20.18■□□□□ 0.82
CHMP4BP1P59074 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 ESPNP-201ENST00000270691 2015 ntBASIC20.18■□□□□ 0.82
CHMP4BP1P59074 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 AC073592.3-201ENST00000625118 1834 ntBASIC20.18■□□□□ 0.82
CHMP4BP1P59074 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP4BP1P59074 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 LINC01126-201ENST00000623515 1646 ntBASIC20.17■□□□□ 0.82
CHMP4BP1P59074 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP4BP1P59074 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms