Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VSX2P58304 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.93■□□□□ 0.3
VSX2P58304 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.93■□□□□ 0.3
VSX2P58304 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.93■□□□□ 0.3
VSX2P58304 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.93■□□□□ 0.3
VSX2P58304 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.93■□□□□ 0.3
VSX2P58304 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.93■□□□□ 0.3
VSX2P58304 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.93■□□□□ 0.3
VSX2P58304 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
VSX2P58304 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.93■□□□□ 0.3
VSX2P58304 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VSX2P58304 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
VSX2P58304 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
VSX2P58304 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VSX2P58304 AL133373.2-201ENST00000623187 2828 ntBASIC16.92■□□□□ 0.3
VSX2P58304 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VSX2P58304 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VSX2P58304 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.92■□□□□ 0.3
VSX2P58304 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.92■□□□□ 0.3
VSX2P58304 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.92■□□□□ 0.3
VSX2P58304 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VSX2P58304 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.92■□□□□ 0.3
VSX2P58304 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.92■□□□□ 0.3
VSX2P58304 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VSX2P58304 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.92■□□□□ 0.3
VSX2P58304 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VSX2P58304 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VSX2P58304 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VSX2P58304 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.91■□□□□ 0.3
VSX2P58304 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VSX2P58304 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
VSX2P58304 AKR1C7P-201ENST00000305623 895 ntBASIC16.91■□□□□ 0.3
VSX2P58304 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 SAPCD2P3-201ENST00000455031 850 ntBASIC16.91■□□□□ 0.3
VSX2P58304 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.91■□□□□ 0.3
VSX2P58304 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.91■□□□□ 0.3
VSX2P58304 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.91■□□□□ 0.3
VSX2P58304 REXO1L6P-202ENST00000619970 1078 ntBASIC16.91■□□□□ 0.3
VSX2P58304 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.91■□□□□ 0.3
VSX2P58304 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VSX2P58304 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.91■□□□□ 0.3
VSX2P58304 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
VSX2P58304 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms