Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.22■□□□□ 0.19
CLDN20P56880 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN20P56880 AC009154.2-201ENST00000621177 724 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 AC046158.3-201ENST00000624947 2558 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN20P56880 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN20P56880 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLDN20P56880 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CLDN20P56880 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN20P56880 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN20P56880 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN20P56880 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN20P56880 KRT18P65-201ENST00000439811 1286 ntBASIC16.21■□□□□ 0.19
CLDN20P56880 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN20P56880 AC091607.1-201ENST00000490318 1060 ntBASIC16.21■□□□□ 0.19
CLDN20P56880 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN20P56880 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.21■□□□□ 0.19
CLDN20P56880 AC233702.3-201ENST00000578656 1387 ntBASIC16.21■□□□□ 0.19
CLDN20P56880 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN20P56880 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN20P56880 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN20P56880 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN20P56880 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN20P56880 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN20P56880 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN20P56880 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN20P56880 REXO1L9P-201ENST00000604264 2108 ntBASIC16.21■□□□□ 0.18
CLDN20P56880 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.21■□□□□ 0.18
CLDN20P56880 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN20P56880 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN20P56880 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.21■□□□□ 0.18
CLDN20P56880 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN20P56880 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN20P56880 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN20P56880 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
CLDN20P56880 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN20P56880 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN20P56880 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN20P56880 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 MIR3652-201ENST00000579335 131 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 AP005901.3-202ENST00000581653 237 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDN20P56880 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 CLEC4GP1-201ENST00000596555 870 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 AC012313.10-201ENST00000623509 926 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN20P56880 AC011270.2-201ENST00000624293 2550 ntBASIC16.2■□□□□ 0.18
CLDN20P56880 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN20P56880 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN20P56880 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CLDN20P56880 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms