Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN8P56748 NKILA-202ENST00000614771 2598 ntBASIC16.81■□□□□ 0.28
CLDN8P56748 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN8P56748 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN8P56748 AC117947.1-201ENST00000427448 529 ntBASIC16.81■□□□□ 0.28
CLDN8P56748 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN8P56748 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN8P56748 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN8P56748 AC066615.1-201ENST00000640911 628 ntBASIC16.81■□□□□ 0.28
CLDN8P56748 AC097493.4-201ENST00000641197 219 ntBASIC16.81■□□□□ 0.28
CLDN8P56748 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN8P56748 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN8P56748 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN8P56748 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN8P56748 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN8P56748 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN8P56748 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN8P56748 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN8P56748 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN8P56748 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 HBZP1-201ENST00000354915 429 ntBASIC16.8■□□□□ 0.28
CLDN8P56748 AL139327.4-201ENST00000612362 153 ntBASIC16.8■□□□□ 0.28
CLDN8P56748 AC133561.5-201ENST00000635547 218 ntBASIC16.8■□□□□ 0.28
CLDN8P56748 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN8P56748 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN8P56748 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN8P56748 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN8P56748 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN8P56748 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLDN8P56748 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN8P56748 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLDN8P56748 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN8P56748 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 AC097374.2-201ENST00000618617 1306 ntBASIC16.79■□□□□ 0.28
CLDN8P56748 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 HOMER2P1-201ENST00000455653 964 ntBASIC16.79■□□□□ 0.28
CLDN8P56748 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN8P56748 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CLDN8P56748 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN8P56748 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 AC011676.5-201ENST00000624864 2660 ntBASIC16.79■□□□□ 0.28
CLDN8P56748 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN8P56748 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN8P56748 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLDN8P56748 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN8P56748 AC116353.5-201ENST00000638148 1699 ntBASIC16.78■□□□□ 0.28
CLDN8P56748 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN8P56748 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN8P56748 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN8P56748 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN8P56748 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN8P56748 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN8P56748 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms