Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GFRA1P56159 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GFRA1P56159 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.81■□□□□ 0.12
GFRA1P56159 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GFRA1P56159 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.81■□□□□ 0.12
GFRA1P56159 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.81■□□□□ 0.12
GFRA1P56159 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 BX005266.1-201ENST00000473402 457 ntBASIC15.81■□□□□ 0.12
GFRA1P56159 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.81■□□□□ 0.12
GFRA1P56159 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.81■□□□□ 0.12
GFRA1P56159 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.81■□□□□ 0.12
GFRA1P56159 MTDHP4-201ENST00000600287 670 ntBASIC15.81■□□□□ 0.12
GFRA1P56159 AL022326.1-202ENST00000641533 845 ntBASIC15.81■□□□□ 0.12
GFRA1P56159 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.81■□□□□ 0.12
GFRA1P56159 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA1P56159 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA1P56159 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA1P56159 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.8■□□□□ 0.12
GFRA1P56159 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA1P56159 MYCLP1-201ENST00000372451 1075 ntBASIC15.8■□□□□ 0.12
GFRA1P56159 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 KLF4P1-201ENST00000412782 1185 ntBASIC15.8■□□□□ 0.12
GFRA1P56159 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.8■□□□□ 0.12
GFRA1P56159 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA1P56159 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 FAM215A-202ENST00000632077 792 ntBASIC15.8■□□□□ 0.12
GFRA1P56159 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 AC004817.3-201ENST00000602957 2129 ntBASIC15.8■□□□□ 0.12
GFRA1P56159 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.8■□□□□ 0.12
GFRA1P56159 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GFRA1P56159 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
GFRA1P56159 AC148477.5-201ENST00000625164 1645 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GFRA1P56159 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GFRA1P56159 RPS2P28-201ENST00000314255 741 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA1P56159 RPS2P1-201ENST00000434010 821 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GFRA1P56159 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA1P56159 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.79■□□□□ 0.12
GFRA1P56159 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.79■□□□□ 0.12
GFRA1P56159 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
GFRA1P56159 MIR7706-201ENST00000613747 67 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.79■□□□□ 0.12
GFRA1P56159 LINC01451-201ENST00000623792 534 ntBASIC15.79■□□□□ 0.12
GFRA1P56159 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GFRA1P56159 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms