Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH12P55289 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH12P55289 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 GCSHP2-201ENST00000560971 527 ntBASIC16.49■□□□□ 0.23
CDH12P55289 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH12P55289 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 AL138966.2-201ENST00000621997 464 ntBASIC16.49■□□□□ 0.23
CDH12P55289 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDH12P55289 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH12P55289 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH12P55289 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDH12P55289 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 TNRC18P3-201ENST00000441896 2691 ntBASIC16.48■□□□□ 0.23
CDH12P55289 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 LINC00167-201ENST00000530583 1419 ntBASIC16.48■□□□□ 0.23
CDH12P55289 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH12P55289 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH12P55289 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH12P55289 AC008687.5-201ENST00000593746 558 ntBASIC16.48■□□□□ 0.23
CDH12P55289 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.48■□□□□ 0.23
CDH12P55289 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDH12P55289 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH12P55289 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH12P55289 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.48■□□□□ 0.23
CDH12P55289 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH12P55289 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 AC009949.1-201ENST00000623048 1830 ntBASIC16.47■□□□□ 0.23
CDH12P55289 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDH12P55289 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH12P55289 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH12P55289 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms