Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.35■□□□□ 0.69
ACLYP53396 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.35■□□□□ 0.69
ACLYP53396 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ACLYP53396 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.35■□□□□ 0.69
ACLYP53396 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.35■□□□□ 0.69
ACLYP53396 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.35■□□□□ 0.69
ACLYP53396 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACLYP53396 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.34■□□□□ 0.69
ACLYP53396 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 FAM185BP-201ENST00000443595 716 ntBASIC19.34■□□□□ 0.69
ACLYP53396 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.34■□□□□ 0.69
ACLYP53396 AC002558.1-201ENST00000488906 803 ntBASIC19.34■□□□□ 0.69
ACLYP53396 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 AC239800.4-201ENST00000603712 296 ntBASIC19.34■□□□□ 0.69
ACLYP53396 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.34■□□□□ 0.69
ACLYP53396 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACLYP53396 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.34■□□□□ 0.69
ACLYP53396 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACLYP53396 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.33■□□□□ 0.69
ACLYP53396 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACLYP53396 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACLYP53396 AL590787.1-201ENST00000568856 1315 ntBASIC19.33■□□□□ 0.69
ACLYP53396 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.33■□□□□ 0.68
ACLYP53396 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.33■□□□□ 0.68
ACLYP53396 PAWRP1-201ENST00000451083 565 ntBASIC19.33■□□□□ 0.68
ACLYP53396 AC023141.5-201ENST00000458585 616 ntBASIC19.33■□□□□ 0.68
ACLYP53396 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.33■□□□□ 0.68
ACLYP53396 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ACLYP53396 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACLYP53396 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.33■□□□□ 0.68
ACLYP53396 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
ACLYP53396 AC092919.2-201ENST00000623631 1645 ntBASIC19.33■□□□□ 0.68
ACLYP53396 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.32■□□□□ 0.68
ACLYP53396 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.32■□□□□ 0.68
ACLYP53396 AC006116.8-202ENST00000587620 1550 ntBASIC19.32■□□□□ 0.68
ACLYP53396 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.32■□□□□ 0.68
ACLYP53396 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ACLYP53396 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ACLYP53396 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 MYCLP1-201ENST00000372451 1075 ntBASIC19.32■□□□□ 0.68
ACLYP53396 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.32■□□□□ 0.68
ACLYP53396 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ACLYP53396 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ACLYP53396 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACLYP53396 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms