Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CLCNKAP51800 FGFR3P6-201ENST00000457012 610 ntBASIC17.34■□□□□ 0.37
CLCNKAP51800 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCNKAP51800 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.34■□□□□ 0.37
CLCNKAP51800 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 AL662844.1-201ENST00000546340 181 ntBASIC17.34■□□□□ 0.37
CLCNKAP51800 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.34■□□□□ 0.37
CLCNKAP51800 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.34■□□□□ 0.37
CLCNKAP51800 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 AD001527.2-201ENST00000622994 785 ntBASIC17.34■□□□□ 0.37
CLCNKAP51800 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 LTB4R2-202ENST00000528054 3092 ntBASIC17.34■□□□□ 0.37
CLCNKAP51800 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCNKAP51800 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLCNKAP51800 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCNKAP51800 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCNKAP51800 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLCNKAP51800 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCNKAP51800 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CLCNKAP51800 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CLCNKAP51800 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 AC005332.8-201ENST00000622750 2735 ntBASIC17.33■□□□□ 0.36
CLCNKAP51800 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLCNKAP51800 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCNKAP51800 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCNKAP51800 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 MTDHP3-201ENST00000594186 672 ntBASIC17.33■□□□□ 0.36
CLCNKAP51800 AC064862.7-201ENST00000604520 867 ntBASIC17.33■□□□□ 0.36
CLCNKAP51800 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLCNKAP51800 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCNKAP51800 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCNKAP51800 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLCNKAP51800 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCNKAP51800 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCNKAP51800 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCNKAP51800 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 BX276092.7-203ENST00000637198 1536 ntBASIC17.32■□□□□ 0.36
CLCNKAP51800 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLCNKAP51800 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
CLCNKAP51800 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLCNKAP51800 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
CLCNKAP51800 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCNKAP51800 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLCNKAP51800 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCNKAP51800 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCNKAP51800 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CLCNKAP51800 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCNKAP51800 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLCNKAP51800 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCNKAP51800 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CLCNKAP51800 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLCNKAP51800 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms