Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 AC092580.3-201ENST00000430932 139 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 AC004890.2-204ENST00000481968 304 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 SLC25A39P2-201ENST00000537614 270 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BRCA2P51587 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
BRCA2P51587 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 AC097637.2-201ENST00000624096 1997 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.59■□□□□ 0.73
BRCA2P51587 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 MIR1909-201ENST00000411312 80 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 SPTLC1P1-201ENST00000447199 261 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.59■□□□□ 0.73
BRCA2P51587 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 AC009949.1-201ENST00000623048 1830 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BRCA2P51587 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.59■□□□□ 0.73
BRCA2P51587 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 AC006116.8-202ENST00000587620 1550 ntBASIC19.59■□□□□ 0.73
BRCA2P51587 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRCA2P51587 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.58■□□□□ 0.73
BRCA2P51587 AC097493.3-201ENST00000509725 367 ntBASIC19.58■□□□□ 0.73
BRCA2P51587 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BRCA2P51587 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCA2P51587 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCA2P51587 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
BRCA2P51587 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.58■□□□□ 0.73
BRCA2P51587 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.58■□□□□ 0.73
BRCA2P51587 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCA2P51587 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRCA2P51587 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRCA2P51587 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.58■□□□□ 0.73
BRCA2P51587 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.58■□□□□ 0.73
BRCA2P51587 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.58■□□□□ 0.73
BRCA2P51587 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.58■□□□□ 0.72
BRCA2P51587 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BRCA2P51587 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCA2P51587 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.57■□□□□ 0.72
BRCA2P51587 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCA2P51587 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.57■□□□□ 0.72
BRCA2P51587 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.57■□□□□ 0.72
BRCA2P51587 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCA2P51587 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.57■□□□□ 0.72
BRCA2P51587 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
BRCA2P51587 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.57■□□□□ 0.72
BRCA2P51587 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.57■□□□□ 0.72
BRCA2P51587 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
BRCA2P51587 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRCA2P51587 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.56■□□□□ 0.72
BRCA2P51587 AC122714.2-201ENST00000502787 707 ntBASIC19.56■□□□□ 0.72
BRCA2P51587 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
BRCA2P51587 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.56■□□□□ 0.72
BRCA2P51587 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
BRCA2P51587 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BRCA2P51587 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms