Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SPDYE14P-201ENST00000442619 822 ntBASIC31.31■■■□□ 2.6
SMARCA4P51532 RARRES2P8-201ENST00000566335 367 ntBASIC31.31■■■□□ 2.6
SMARCA4P51532 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA4P51532 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA4P51532 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA4P51532 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA4P51532 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA4P51532 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA4P51532 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
SMARCA4P51532 MEIS3P1-201ENST00000495167 958 ntBASIC31.3■■■□□ 2.6
SMARCA4P51532 BSG-214ENST00000614867 960 ntTSL 3 BASIC31.3■■■□□ 2.6
SMARCA4P51532 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC31.3■■■□□ 2.6
SMARCA4P51532 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA4P51532 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
SMARCA4P51532 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA4P51532 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA4P51532 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA4P51532 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA4P51532 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA4P51532 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC31.29■■■□□ 2.6
SMARCA4P51532 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA4P51532 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA4P51532 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
SMARCA4P51532 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC31.29■■■□□ 2.6
SMARCA4P51532 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA4P51532 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC31.29■■■□□ 2.6
SMARCA4P51532 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 VMA21-202ENST00000370361 693 ntTSL 5 BASIC31.28■■■□□ 2.6
SMARCA4P51532 HNRNPFP1-201ENST00000391730 1133 ntBASIC31.28■■■□□ 2.6
SMARCA4P51532 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
SMARCA4P51532 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC31.28■■■□□ 2.6
SMARCA4P51532 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC31.28■■■□□ 2.6
SMARCA4P51532 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA4P51532 AC129492.6-201ENST00000611383 1305 ntBASIC31.28■■■□□ 2.6
SMARCA4P51532 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
SMARCA4P51532 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA4P51532 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA4P51532 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 RPL30-202ENST00000396070 440 ntTSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC31.27■■■□□ 2.6
SMARCA4P51532 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SMARCA4P51532 AC125807.1-201ENST00000483097 614 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 TERF1P3-201ENST00000505638 1227 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 AC140878.1-201ENST00000565277 250 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA4P51532 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 TFAMP1-201ENST00000412727 736 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC31.27■■■□□ 2.6
SMARCA4P51532 AC007274.1-201ENST00000439805 662 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC31.27■■■□□ 2.6
SMARCA4P51532 AC008761.3-201ENST00000624803 892 ntBASIC31.27■■■□□ 2.6
SMARCA4P51532 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC31.26■■■□□ 2.6
SMARCA4P51532 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA4P51532 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC31.26■■■□□ 2.59
SMARCA4P51532 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 AC107890.1-201ENST00000422478 521 ntBASIC31.26■■■□□ 2.59
SMARCA4P51532 FAM86C2P-203ENST00000528684 1004 ntBASIC31.26■■■□□ 2.59
SMARCA4P51532 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC31.26■■■□□ 2.59
SMARCA4P51532 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC31.26■■■□□ 2.59
SMARCA4P51532 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA4P51532 AL135999.2-201ENST00000622438 1686 ntBASIC31.25■■■□□ 2.59
SMARCA4P51532 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC31.25■■■□□ 2.59
SMARCA4P51532 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 AL592309.1-201ENST00000443127 649 ntBASIC31.25■■■□□ 2.59
SMARCA4P51532 GAPDHP21-201ENST00000450301 1010 ntBASIC31.25■■■□□ 2.59
SMARCA4P51532 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC31.25■■■□□ 2.59
SMARCA4P51532 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC31.25■■■□□ 2.59
SMARCA4P51532 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC31.25■■■□□ 2.59
SMARCA4P51532 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC31.25■■■□□ 2.59
SMARCA4P51532 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
SMARCA4P51532 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC31.25■■■□□ 2.59
SMARCA4P51532 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC31.25■■■□□ 2.59
SMARCA4P51532 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA4P51532 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA4P51532 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA4P51532 TREML5P-201ENST00000421694 576 ntBASIC31.24■■■□□ 2.59
SMARCA4P51532 OARD1-208ENST00000469104 704 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA4P51532 BAD-207ENST00000544785 525 ntTSL 3 BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms