Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC009533.2-201ENST00000543664 586 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A12P48065 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 AC011467.2-201ENST00000598425 242 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AC010331.1-201ENST00000611423 582 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A12P48065 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 MYCLP1-201ENST00000372451 1075 ntBASIC17.03■□□□□ 0.32
SLC6A12P48065 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A12P48065 AC103564.2-201ENST00000432853 1299 ntBASIC17.03■□□□□ 0.32
SLC6A12P48065 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A12P48065 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 AC109462.3-201ENST00000573934 613 ntBASIC17.03■□□□□ 0.32
SLC6A12P48065 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 Z69720.1-201ENST00000601483 472 ntBASIC17.03■□□□□ 0.32
SLC6A12P48065 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.03■□□□□ 0.32
SLC6A12P48065 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A12P48065 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A12P48065 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A12P48065 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC6A12P48065 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SLC6A12P48065 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC6A12P48065 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC6A12P48065 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
SLC6A12P48065 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC6A12P48065 LTB4R2-202ENST00000528054 3092 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC6A12P48065 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 IGHV3-47-201ENST00000425060 335 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 KRT17P6-201ENST00000453795 1220 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SLC6A12P48065 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 AC069148.1-201ENST00000608741 768 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 AC091076.1-201ENST00000610741 619 ntBASIC17.02■□□□□ 0.32
SLC6A12P48065 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A12P48065 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC6A12P48065 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC6A12P48065 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SLC6A12P48065 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SLC6A12P48065 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC6A12P48065 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SLC6A12P48065 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC6A12P48065 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms