Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD13P35453 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD13P35453 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXD13P35453 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXD13P35453 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXD13P35453 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 PMPCAP1-201ENST00000508114 1576 ntBASIC19.25■□□□□ 0.67
HOXD13P35453 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 SLC25A1P3-201ENST00000395415 828 ntBASIC19.25■□□□□ 0.67
HOXD13P35453 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
HOXD13P35453 NUS1P2-201ENST00000417358 873 ntBASIC19.25■□□□□ 0.67
HOXD13P35453 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXD13P35453 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXD13P35453 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD13P35453 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXD13P35453 AP000867.4-201ENST00000641616 219 ntBASIC19.25■□□□□ 0.67
HOXD13P35453 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXD13P35453 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXD13P35453 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD13P35453 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD13P35453 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD13P35453 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD13P35453 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXD13P35453 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
HOXD13P35453 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD13P35453 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD13P35453 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD13P35453 NUS1P1-201ENST00000446295 882 ntBASIC19.24■□□□□ 0.67
HOXD13P35453 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD13P35453 MIR3652-201ENST00000579335 131 ntBASIC19.24■□□□□ 0.67
HOXD13P35453 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD13P35453 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 AC012313.10-201ENST00000623509 926 ntBASIC19.24■□□□□ 0.67
HOXD13P35453 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD13P35453 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HOXD13P35453 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD13P35453 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HOXD13P35453 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HOXD13P35453 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD13P35453 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD13P35453 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD13P35453 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 AC080080.1-201ENST00000625121 2420 ntBASIC19.23■□□□□ 0.67
HOXD13P35453 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
HOXD13P35453 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD13P35453 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms